home/categories/research
domain cluster

Research

Scientific computing and academic tools.

8969 مهارةall categories
sorting
stars
current ordering strategy
query
all entries
refine the visible subset
scientific-computing
328

spring-animation

Remotion spring physics for motion graphics video production. Bouncy entrances, elastic trails, orchestrated sequences, physics presets, and organic motion patterns that interpolate() alone cannot achieve.

notedit
notedit
research
open
academic
325

medium-posts

When the user wants to write, publish, republish, or optimize posts on Medium.com (canonical tags, distribution, Medium SEO). Also use when the user mentions "Medium," "Medium article," "Medium story," "Medium publishing," "canonical Medium," or "publish on Medium." Not for general parasite SEO when Medium is not the target platform—use parasite-seo. For AI search visibility strategy, use generative-engine-optimization.

kostja94
kostja94
research
open
academic
325

eeat-signals

When the user wants to improve E-E-A-T, add trust signals, or optimize for expertise and authority. Also use when the user mentions "E-E-A-T," "E-E-A-T signals," "experience expertise authority trust," "author bio," "YMYL," "trust signals," "expertise signals," "authority signals," "citations," "references," or "credibility." For headings, use heading-structure.

kostja94
kostja94
research
open
bioinformatics
325

structural-biology

Structure retrieval, confidence-aware AlphaFold DB usage, coordinate download, PAE and pLDDT interpretation, and structure-guided biological annotation.

Runchuan-BU
Runchuan-BU
research
open
bioinformatics
325

cell-annotation

Automated and marker-guided single-cell cell type annotation using CellTypist, marker review, reference transfer, and confidence-aware label curation.

Runchuan-BU
Runchuan-BU
research
open
bioinformatics
325

scrna-preprocessing-clustering

Standard scRNA-seq preprocessing and clustering with Scanpy. Use for QC, normalization, HVG selection, PCA, neighbor graph construction, UMAP, Leiden clustering, and export of an analysis-ready AnnData object.

Runchuan-BU
Runchuan-BU
research
open
bioinformatics
325

sds-gel-review

Review SDS-PAGE or protein purification gel images using DNA sequence, protein sequence, base-pair length, expected protein size, and lane labels. Use when the user wants to judge whether a gel ran well, whether the main band matches the expected product, or whether there may be impurities, degradation, aggregation, or low expression.

Runchuan-BU
Runchuan-BU
research
open
lab-tools
325

bio-tools

Biology research tools reference. Always available inside agent containers.

Runchuan-BU
Runchuan-BU
research
open
scientific-computing
325

proteomics

Mass spectrometry proteomics QC, quantification, comparative analysis, and export for DDA, DIA, and protein-level result tables.

Runchuan-BU
Runchuan-BU
research
open
scientific-computing
325

atac-seq

ATAC-seq processing with assay QC, MACS3 peak calling, consensus peak matrices, differential accessibility, and motif or footprint follow-up.

Runchuan-BU
Runchuan-BU
research
open
academic
322

competitor-scan

Research best-in-class products using Browser MCP and WebSearch

WellApp-ai
WellApp-ai
research
open
bioinformatics
322

image-upscaling

Upscale and enhance images with Real-ESRGAN, Thera, Topaz, FLUX Upscaler via inference.sh CLI. Models: Real-ESRGAN, Thera (any size), FLUX Dev Upscaler, Topaz Image Upscaler. Use for: enhance low-res images, upscale AI art, restore old photos, increase resolution. Triggers: upscale image, image upscaler, enhance image, increase resolution, real esrgan, ai upscale, super resolution, image enhancement, upscaling, enlarge image, higher resolution, 4k upscale, hd upscale

inference-sh
inference-sh
research
open
computational-chemistry
322

qwen-image-2-pro

Generate images with Alibaba Qwen-Image-2.0-Pro via inference.sh CLI. Professional text rendering, fine-grained realism, enhanced semantic adherence. Ideal for posters, banners, and text-heavy designs. Triggers: qwen image pro, qwen-image-pro, qwen 2 pro, alibaba image pro, dashscope pro, professional text rendering

inference-sh
inference-sh
research
open
lab-tools
322

elevenlabs-voice-isolator

ElevenLabs voice isolator - remove background noise and isolate vocals from audio via inference.sh CLI. Capabilities: noise removal, voice extraction, audio cleanup, background removal. Use for: podcast cleanup, interview audio, music vocals, noisy recordings, audio restoration. Triggers: voice isolator, noise removal, background removal, isolate voice, clean audio, remove background noise, audio cleanup, voice extraction, elevenlabs isolator, eleven labs noise, vocal isolation, denoise, audio restoration, voice separation

inference-sh
inference-sh
research
open
lab-tools
322

elevenlabs-stt

ElevenLabs speech-to-text with Scribe models and forced alignment via inference.sh CLI. Models: Scribe v1/v2 (98%+ accuracy, 90+ languages). Capabilities: transcription, speaker diarization, audio event tagging, word-level timestamps, forced alignment, subtitle generation. Use for: meeting transcription, subtitles, podcast transcripts, lip-sync timing, karaoke. Triggers: elevenlabs stt, elevenlabs transcription, scribe, elevenlabs speech to text, forced alignment, word alignment, subtitle timing, diarization, speaker identification, audio event detection, eleven labs transcribe

inference-sh
inference-sh
research
open
lab-tools
320

ab-test-setup

When the user wants to plan, design, or implement an A/B test or experiment. Also use when the user mentions "A/B test," "split test," "experiment," "test this change," "variant copy," "multivariate test," "hypothesis," "should I test this," "which version is better," "test two versions," "statistical significance," or "how long should I run this test." Use this whenever someone is comparing two approaches and wants to measure which performs better. For tracking implementation, see analytics-tracking. For page-level conversion optimization, see page-cro.

marian2js
marian2js
research
open
academic
319

daily-brief

Generate personalized news intelligence with verified sources (7-day freshness requirement)

huytieu
huytieu
research
open
academic
319

comment-quality

Review and fix temporal references in code comments.

notque
notque
research
open
lab-tools
319

toolkit-evolution

Closed-loop toolkit self-improvement: discover gaps, diagnose, propose, critique, build, test, evolve.

notque
notque
research
open
computational-chemistry
316

add-sugar

Add syntactic sugar features to Butane experimental spec versions

coreos
coreos
research
open
scientific-computing
313

econ-visualization

Create publication-quality charts and graphs for economics papers.

meleantonio
meleantonio
research
open
astronomy-physics
310

troubleshooting-astro-deployments

Troubleshoot Astronomer production deployments with Astro CLI. Use when investigating deployment issues, viewing production logs, analyzing failures, or managing deployment environment variables.

astronomer
astronomer
research
open
Previous
Page 115 / 374
Next