scientific-computing
304
simple-biology-explainer
Explains complex biological concepts, structures, and processes in simple, accessible language using analogies and examples, tailored for students and laypeople.
ECNU-ICALK
research
sorting
stars
current ordering strategy
query
all entries
refine the visible subset
scientific-computing
304
list-random-chemical-elements-with-properties
Generates a list of randomly selected chemical elements, displaying their symbol, atomic number, and common usage.
ECNU-ICALK
research
scientific-computing
304
histology-mnemonic-generator
Generates mnemonics for histology topics, ensuring all items are relevant histological structures or cellular components, excluding external factors or non-structural concepts.
ECNU-ICALK
research
scientific-computing
304
explain-chemistry-concepts-in-one-sentence
Provides concise, single-sentence explanations or representations for various chemistry topics including stoichiometry, atomic structure, bonding, and periodic trends.
ECNU-ICALK
research
scientific-computing
304
chromochemical-gas-giant-classifier
Generates detailed, scientifically plausible visual descriptions, hex color codes, and etymological name derivations for gas giants. Capable of describing standard chromochemical types or generating new classifications adhering to specific suffix conventions (-ic for chemistry, -ian/-ean for appearance).
ECNU-ICALK
research
scientific-computing
304
linux-tcp-memory-parameter-calculator
Calculates the net.ipv4.tcp_mem kernel parameter values based on the number of simultaneous TCP connections and minimum buffer sizes, specifically accounting for kernel overhead doubling.
ECNU-ICALK
research
scientific-computing
304
translate-verbal-math-to-algebra
Translates verbal descriptions of mathematical relationships or operation sequences into standard algebraic equations or expressions without simplification.
ECNU-ICALK
research
scientific-computing
304
einsteinian-wormhole-physics-simulation
Simulates theoretical wormhole scenarios adhering to Einstein's descriptions, conservation laws, and causality, preventing time travel paradoxes.
ECNU-ICALK
research
scientific-computing
304
criao-de-simulado-de-mltipla-escolha-complexo
Gera simulados de questões de múltipla escolha com alto nível de complexidade sobre temas variados, apresentando as respostas agrupadas ao final.
ECNU-ICALK
research
scientific-computing
304
define-fluid-mechanicsthermodynamics-terms
Provides definitions, mathematical expressions, and simple examples for terms strictly within the context of Fluid Mechanics and Thermodynamics.
ECNU-ICALK
research
lab-tools
303
instrument-data-to-allotrope
Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this skill when scientists need to standardize instrument data for LIMS systems, data lakes, or downstream analysis. Supports auto-detection of instrument types. Outputs include full ASM JSON, flattened CSV for easy import, and exportable Python code for data engineers. Common triggers include converting instrument files, standardizing lab data, preparing data for upload to LIMS/ELN systems, or generating parser code for production pipelines.
anthropics
research
scientific-computing
303
single-cell-rna-qc
Performs quality control on single-cell RNA-seq data (.h5ad or .h5 files) using scverse best practices with MAD-based filtering and comprehensive visualizations. Use when users request QC analysis, filtering low-quality cells, assessing data quality, or following scverse/scanpy best practices for single-cell analysis.
anthropics
research
scientific-computing
303
clinical-trial-protocol-skill
Generate clinical trial protocols for medical devices or drugs. This skill should be used when users say "Create a clinical trial protocol", "Generate protocol for [device/drug]", "Help me design a clinical study", "Research similar trials for [intervention]", or when developing FDA submission documentation for investigational products.
anthropics
research
bioinformatics
303
scvi-tools
Deep learning for single-cell analysis using scvi-tools. This skill should be used when users need (1) data integration and batch correction with scVI/scANVI, (2) ATAC-seq analysis with PeakVI, (3) CITE-seq multi-modal analysis with totalVI, (4) multiome RNA+ATAC analysis with MultiVI, (5) spatial transcriptomics deconvolution with DestVI, (6) label transfer and reference mapping with scANVI/scArches, (7) RNA velocity with veloVI, or (8) any deep learning-based single-cell method. Triggers include mentions of scVI, scANVI, totalVI, PeakVI, MultiVI, DestVI, veloVI, sysVI, scArches, variational autoencoder, VAE, batch correction, data integration, multi-modal, CITE-seq, multiome, reference mapping, latent space.
anthropics
research
bioinformatics
303
nextflow-development
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.
anthropics
research
computational-chemistry
299
pipeline-health
Analyze pipeline coverage and forecast accuracy
davekilleen
research
academic
298
challenge-that
Force critical evaluation of proposals, requirements, or decisions by analyzing from multiple adversarial perspectives. Triggers on: accepting a proposal without pushback, 'sounds good', 'let's go with', design decisions with unstated tradeoffs, unchallenged assumptions, premature consensus. Invoke with /challenge-that.
NTCoding
research
academic
297
web-search
Search the public web for up-to-date facts. Works out of the box with Jina (default, no API key needed); optionally Serper, Tavily, or Brave Search. Use when workbook context is insufficient and fresh external references are needed.
tmustier
research
computational-chemistry
297
silicon-assimilator
硅基同化官，专门识别人类低效环节并推进 Agent 接管、自动化与流程并轨
linkerlin
research
academic
295
address-review
Check a PR for review comments, evaluate them, and address valid ones
gittower
research