lab-tools
213
openspec-verify-change
Verify implementation matches change artifacts. Use when the user wants to validate that implementation is complete, correct, and coherent before archiving.
SAP
research
sorting
stars
current ordering strategy
query
all entries
refine the visible subset
scientific-computing
213
biopython
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation.
ai4protein
research
academic
211
aivc-literature-scout
Use when the user wants a recent literature sweep for Awesome-Virtual-Cell, especially for latest papers, Nature-family journals, major labs, big groups, or a time-bounded update of what the README is missing.
Boom5426
research
academic
211
aivc-curator
Use when the user wants to judge whether a paper, dataset, benchmark, blog, or related resource belongs in Awesome-Virtual-Cell, whether an existing README entry should be updated, where an item should be placed, or how it should be written in house style.
Boom5426
research
lab-tools
210
openspec-archive-change
Archive a completed change in the experimental workflow. Use when the user wants to finalize and archive a change after implementation is complete.
typst-doc-cn
research
academic
207
convergence-debugger
Expert debugging guide for AI Counsel's convergence detection system. Use when deliberations aren't converging as expected, early stopping fails, semantic similarity seems wrong, or voting vs semantic status conflicts occur.
blueman82
research
academic
207
academic-paper-composer
Systematic writing framework for philosophy and interdisciplinary academic papers from optimized outline to submission-ready manuscript. Use when users want to: (1) write a paper from a detailed outline, (2) ensure quality control during writing, (3) maintain consistency across chapters, (4) prepare a submission-ready manuscript, or (5) systematically execute a planned paper. Triggered by phrases like 'write the paper from this outline,' 'compose the full manuscript,' 'execute the outline,' or when users have completed strategic planning (academic-paper-strategist skill) and are ready to write. Takes optimized outline as input; outputs complete manuscript with iterative quality checks.
lishix520
research
academic
205
summarize-doc
Create an executive summary of any document at the appropriate level of detail. Triggers on "summarize this", "main points", "give me the gist".
kbanc85
research
academic
205
research
Deep research on a topic with web sources, memory integration, and stored findings. Also handles quick context-aware lookups when current information would improve the conversation. Triggers on "research this", "look into", "find out about", "dig into", "look up", "what's new with", "check current", "any updates on", "latest info".
kbanc85
research
academic
205
memory-audit
Show everything Claudia knows with provenance tracing and entity counts. Triggers on "what do you know?", "show memories", "memory audit", "what do you remember about".
kbanc85
research
academic
203
local-websearch
Search the web privately via a self-hosted SearXNG metasearch engine.
CoWork-OS
research
lab-tools
203
tsh-implementing-observability
Observability patterns for logging, monitoring, alerting, and distributed tracing. Use when implementing metrics collection, log aggregation, alerting rules, or distributed tracing across services.
TheSoftwareHouse
research
scientific-computing
201
deep-research
Execute autonomous multi-step research using Google Gemini Deep Research Agent. Use for: market analysis, competitive landscaping, literature reviews, technical research, due diligence. Takes 2-10 minutes but produces detailed, cited reports. Costs $2-5 per task.
sanjay3290
research
academic
200
paper-research
学术论文调研技能，用于搜索、筛选和分析学术论文。支持 arXiv、Google Scholar、Semantic Scholar 等学术数据库，提供论文检索、引用分析、研究趋势追踪、文献综述生成等功能。触发条件：用户提及"论文"、"学术研究"、"文献综述"、"arXiv"、"研究趋势"、"学术搜索"等关键词。
stophobia
research
astronomy-physics
200
gemini-nanobanana
Use this skill when users ask to generate, edit, or compose images with Gemini Nano Banana 2, including text-to-image, image editing, multi-image composition, grounding, and output sizing/saving controls.
duotify
research
academic
198
handling-pr-comments
Address PR review feedback systematically — fetch inline comments, review bodies, handle outside-diff-range comments, resolve threads with proper attribution
dsifry
research
academic
197
council
Multi-perspective deliberation on a question. Use when the user says "get perspectives on", "multiple viewpoints", "council on this", "devil's advocate", "stress test this idea", "red team this", "poke holes in", "second opinion on", "what am I missing", or wants multi-perspective analysis of a decision, design, or strategy.
gupsammy
research
academic
196
docs-pr-review
Review a docs PR from someone else. Triage issues by severity, draft comments with rationale, and focus on what matters. Use when reviewing a PR, not when checking your own work (use docs-pre-ship-review for that).
ClickHouse
research
academic
196
community-notes
View, write, rate, and browse Community Notes on X/Twitter posts. Use when users want to interact with Community Notes — reading fact-checks, contributing notes, or rating existing notes as helpful or not.
nirholas
research
academic
195
zotero-better-notes-guide
Guide to Zotero Better Notes for comprehensive note-taking in research
wentorai
research
academic
195
onecite-reference-guide
AI toolkit to parse, complete, and format academic references
wentorai
research
academic
195
unpaywall-api
Find free legal full-text versions of scholarly articles via Unpaywall
wentorai
research