This skill should be used when the user asks to "create a packmol input", "pack molecules with packmol", "solvate a protein", "build an initial configuration", "setup molecular dynamics", or discusses molecular packing, solvation, or building simulation starting structures.
Calculate CO2 emissions and carbon footprint from BIM model data. Analyze embodied carbon by material, element, and building system.
Assist with quantity takeoff using CWICR data. Calculate quantities from dimensions, apply waste factors, and suggest related work items.
Convert between construction measurement units. Handle metric/imperial conversion, area/volume calculations, and unit normalization for CWICR data.
Extract data from construction images using AI Vision. Analyze site photos, scanned documents, drawings.
Process drone survey data for construction sites. Generate orthomosaics, DEMs, point clouds, calculate volumes, track progress, and integrate with BIM models for comparison.
Integrate and analyze telematics data from heavy construction equipment. Track location, utilization, fuel consumption, maintenance needs, and operator behavior.
Find substitute materials using CWICR data. Identify equivalent alternatives based on function, cost, and availability.
Aggregate and analyze IoT sensor data from construction sites. Collect data from multiple sensor types, detect anomalies, and trigger alerts for safety and quality monitoring.
Monitor environmental conditions on construction sites. Track air quality, noise levels, vibration, dust, and weather to ensure compliance and worker safety.
Screen incoming NDAs and classify them as GREEN (standard), YELLOW (needs review), or RED (significant issues). Use when a new NDA comes in from sales or business development, when assessing NDA risk level, or when deciding whether an NDA needs full counsel review.
Expert in color theory, palette harmony, and perceptual color science for computational photo composition. Specializes in earth-mover distance optimization, warm/cool alternation, diversity-aware palette selection, and hue-based photo sequencing. Activate on "color palette", "color harmony", "warm cool", "earth mover distance", "Wasserstein", "LAB space", "hue sorted", "palette matching". NOT for basic RGB manipulation (use standard image processing), single-photo color grading (use native-app-designer), UI color schemes (use vaporwave-glassomorphic-ui-designer), or color blindness simulation (accessibility specialists).
Process, analyze, and visualize geospatial data at scale. Handles drone imagery, GPS tracks, GeoJSON optimization, coordinate transformations, and tile generation. Use for mapping apps, drone data processing, location-based services. Activate on "geospatial", "GIS", "PostGIS", "GeoJSON", "map tiles", "coordinate systems". NOT for simple address validation, basic distance calculations, or static map embeds.
Expert in temporal event detection, spatio-temporal clustering (ST-DBSCAN), and photo context understanding. Use for detecting photo events, clustering by time/location, shareability prediction, place recognition, event significance scoring, and life event detection. Activate on 'event detection', 'temporal clustering', 'ST-DBSCAN', 'spatio-temporal', 'shareability prediction', 'place recognition', 'life events', 'photo events', 'temporal diversity'. NOT for individual photo aesthetic quality (use photo-composition-critic), color palette analysis (use color-theory-palette-harmony-expert), face recognition implementation (use photo-content-recognition-curation-expert), or basic EXIF timestamp extraction.
Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this skill when scientists need to standardize instrument data for LIMS systems, data lakes, or downstream analysis. Supports auto-detection of instrument types. Outputs include full ASM JSON, flattened CSV for easy import, and exportable Python code for data engineers. Common triggers include converting instrument files, standardizing lab data, preparing data for upload to LIMS/ELN systems, or generating parser code for production pipelines.
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.
Real-time rope/cable physics using Position-Based Dynamics (PBD), Verlet integration, and constraint solvers. Expert in quaternion math, Gauss-Seidel/Jacobi solvers, and tangling detection. Activate on 'rope simulation', 'PBD', 'Position-Based Dynamics', 'Verlet', 'constraint solver', 'quaternion', 'cable dynamics', 'cloth simulation', 'leash physics'. NOT for fluid dynamics (SPH/MPM), fracture simulation (FEM), offline cinematic physics, molecular dynamics, or general game physics engines (use Unity/Unreal built-ins).
Semantic image-text matching with CLIP and alternatives. Use for image search, zero-shot classification, similarity matching. NOT for counting objects, fine-grained classification (celebrities, car models), spatial reasoning, or compositional queries. Activate on "CLIP", "embeddings", "image similarity", "semantic search", "zero-shot classification", "image-text matching".
Run or continue a differential debugging session between two implementations, traces, captures, or outputs. Record artifact identity, exact commands, first mismatch progression, findings, validation, and next probe in a durable session log.
Safe testing practices to prevent real-world side-effects. TRIGGER when user asks to "run tests", "test this", "write tests", "debug", "mock", "fixture", "integration test", "unit test", or when testing code that touches network, database, filesystem, or external services. Use BEFORE executing any test that could affect production systems.
