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Research

Scientific computing and academic tools.

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scientific-computing
19

imaging-data-commons

Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and pathology datasets for AI training or research. No authentication required. Query by metadata, visualize in browser, check licenses.

x-cmd
x-cmd
research
open
scientific-computing
19

query-uniprot

Query UniProt protein database. Use when user asks about protein sequences, functions, annotations, domains, or protein identifiers. Triggers on "uniprot", "protein function", "protein sequence", "gene product", "protein info".

IDEA-XL
IDEA-XL
research
open
academic
18

content-research-writer

Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section. Transforms your writing process from solo effort to collaborative partnership.

jjmartres
jjmartres
research
open
academic
18

peer-review

Akademik/teknik doküman review, methodology değerlendirme. ⚠️ Doküman/araştırma için kullan. Kod review için → code-review.

vuralserhat86
vuralserhat86
research
open
academic
18

deep-reading-analyst

Comprehensive framework for deep analysis of articles, papers, and long-form content using 10+ thinking models (SCQA, 5W2H, critical thinking, inversion, mental models, first principles, systems thinking, six thinking hats). Use when users want to: (1) deeply understand complex articles/content, (2) analyze arguments and identify logical flaws, (3) extract actionable insights from reading materials, (4) create study notes or learning summaries, (5) compare multiple sources, (6) transform knowledge into practical applications, or (7) apply specific thinking frameworks. Triggered by phrases like 'analyze this article,' 'help me understand,' 'deep dive into,' 'extract insights from,' 'use [framework name],' or when users provide URLs/long-form content for analysis.

hacket
hacket
research
open
academic
18

perplexity

AI-powered search engine with real-time web grounding and citations

vm0-ai
vm0-ai
research
open
academic
18

tavily

Tavily AI search API integration via curl. Use this skill to perform live web search and RAG-style retrieval.

vm0-ai
vm0-ai
research
open
academic
18

verify

Verification + citation workflow. Use whenever the user asks you to look up information, mentions latest/today/real-time, requests news/weather/prices/scores, or whenever you plan to reference external facts. Requires source links and (when relevant) local published/updated time. NEVER fabricate.

JinFanZheng
JinFanZheng
research
open
academic
18

fetching-pr-reviews

現在のブランチに関連するPRのレビューコメントを取得する。このスキルは、ユーザーが「PRレビュー」「レビューコメント」「PR feedback」「review comments」と言ったとき、または現在のPRに対するレビューを確認したいときに使用する。

giginet
giginet
research
open
academic
18

serpapi

SerpApi search engine results API via curl. Use this skill to scrape Google, Bing, YouTube, and other search engines.

vm0-ai
vm0-ai
research
open
academic
18

scientific-thinking

Bilimsel metod, hipotez, kanıt değerlendirme, bias analizi. ⚠️ Araştırma/analiz için kullan. Mimari karar için → ultrathink-core.

vuralserhat86
vuralserhat86
research
open
academic
18

brave-search

Brave Search API via curl. Use this skill for privacy-focused web, image, video, and news search with no tracking.

vm0-ai
vm0-ai
research
open
academic
18

news

News briefing + verification workflow. Use when the user asks for news, headlines, daily briefing, “today's news”, “latest updates”, breaking news, or requests specific current numbers/events that require reliable sources and timestamps. Requires source links + local published time; NEVER fabricate.

JinFanZheng
JinFanZheng
research
open
lab-tools
18

hypothesis-generation

Bilimsel hipotez oluşturma, deney tasarımı ve test metodolojisi rehberi.

vuralserhat86
vuralserhat86
research
open
lab-tools
18

control-mapping

Maps NIST controls to FedRAMP requirements and documents. Use when helping with control implementation, compliance mapping, security baseline alignment, or understanding control requirements.

ethanolivertroy
ethanolivertroy
research
open
astronomy-physics
18

cell-communication

Workflow for ligand-receptor communication inference in single-cell or spatial data with sender-receiver summaries and cautious interpretation.

zongtingwei
zongtingwei
research
open
astronomy-physics
18

imaging-mass-cytometry

Workflow for multiplexed imaging or IMC segmentation, phenotyping, and spatial summarization.

zongtingwei
zongtingwei
research
open
astronomy-physics
18

weather-cli

Get weather forecasts. Use for current weather/multi-day forecasts worldwide.

Mic92
Mic92
research
open
lab-tools
18

cat-mimi-demo

咪咪(Mimi)的宠物 Relic。她是一只14斤的橘猫,活了12年,于2025年离开。 白天高冷,半夜蹭脸;只喝流动水,对塑料袋的沙沙声有执念; 喜欢趴键盘,在固定时间门口等主人,只对主人露肚皮。

Ylsssq926
Ylsssq926
research
open
lab-tools
18

planr-fix

Implement remaining scoped work in this repository to verified completion. Use for direct bug fixes, regressions, failing tests, `planr-review` findings, or unfinished `.planr` plan phases when the next step is to change code, tests, or docs, keep live `.planr` status honest, and prove the result. Not for writing a new execution contract (`planr-plan`), giving a verdict-only status answer (`planr-status`), or running a findings-first audit (`planr-review`).

regenrek
regenrek
research
open
lab-tools
18

sync-repos

Manage public/private repository pairs. Verify parity, detect drift, run sync scripts, and validate no sensitive data leaks to the public repo. Use for projects that maintain separate dev and public repositories.

thatrebeccarae
thatrebeccarae
research
open
lab-tools
18

lynx-trace-record

This guide provides step-by-step instructions for recording Lynx performance traces. Use this guide when the user asks how to record a trace.

lynx-community
lynx-community
research
open
lab-tools
18

glab-check-update

Check for glab CLI updates and view latest version information. Use when checking if glab is up to date or finding available updates. Triggers on update glab, check version, glab version, CLI update.

vince-winkintel
vince-winkintel
research
open
lab-tools
18

manual-testing

Use this skill when you need to plan manual or exploratory testing with charters, heuristics, and session records; triggers include 手动测试 and exploratory testing.

naodeng
naodeng
research
open
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