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Research

Scientific computing and academic tools.

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lab-tools
15

learn

WHEN capturing learnings/gotchas/decisions into CLAUDE.md; NOT trivial changes; guides what to record, where it lives, and format.

mintuz
mintuz
research
open
lab-tools
15

bubbaloop-physical-ai

Manage physical sensors, cameras, and actuators via the bubbaloop skill runtime. Query real-time sensor data, control node lifecycle, and monitor hardware health.

kornia
kornia
research
open
lab-tools
15

detectability-assessment

Assess whether infringement of proposed patent claims can be detected in products. Use when the user wants to evaluate claim enforceability or detectability.

arcprime-ip
arcprime-ip
research
open
scientific-computing
15

contextual-equivalence

A skill for proving contextual equivalence between programs using operational semantics, bisimulation, and related techniques.

rainoftime
rainoftime
research
open
scientific-computing
15

interprocedural-analysis

A skill for analyzing programs across function/procedure boundaries, enabling whole-program analysis.

rainoftime
rainoftime
research
open
scientific-computing
15

bisimulation-checker

Checks bisimulation for process calculi. Use when: (1) Proving equivalence, (2) Compiler optimization, (3) Protocol verification.

rainoftime
rainoftime
research
open
scientific-computing
15

research

Deep research on technical topics, libraries, APIs, or concepts. Use when asked to research, investigate, explore deeply, or gather comprehensive information on a topic. Saves learnings to .agents/research/.

colmarius
colmarius
research
open
scientific-computing
15

fluidsim

Framework for computational fluid dynamics simulations using Python. Use when running fluid dynamics simulations including Navier-Stokes equations (2D/3D), shallow water equations, stratified flows, or when analyzing turbulence, vortex dynamics, or geophysical flows. Provides pseudospectral methods with FFT, HPC support, and comprehensive output analysis.

agent-skills-hub
agent-skills-hub
research
open
scientific-computing
15

pymatgen

Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science.

agent-skills-hub
agent-skills-hub
research
open
scientific-computing
15

pcc-opus

Parallel Claude Coordinator (Opus Edition) - Maximum quality exploration with Opus scouts AND Opus implementers. Use for critical, complex tasks where exploration quality is paramount.

Kasempiternal
Kasempiternal
research
open
scientific-computing
14

exploratory-data-analysis

Analyze datasets to discover patterns, anomalies, and relationships. Use when exploring data files, generating statistical summaries, checking data quality, or creating visualizations. Supports CSV, Excel, JSON, Parquet, and more.

jackspace
jackspace
research
open
academic
14

research

Company due diligence, technology deep-dives, market analysis, and topic exploration for cyber•Fund investment decisions, content creation, and personal projects. Supports 3 intensity levels (quick/standard/deep) for speed-quality tradeoffs.

Gerstep
Gerstep
research
open
academic
14

research-to-essay

Research-driven essay and post creation with thematic synthesis, citation management, and voice calibration. Use when creating Substack/LinkedIn posts, long-form essays synthesizing multiple sources, or publication-grade writing requiring web search, narrative arc, and proper attribution. Triggers include "research and write about [topic]" or "dig into this idea and write."

leegonzales
leegonzales
research
open
academic
14

prose-polish

Evaluate and elevate writing effectiveness through multi-dimensional quality assessment. Analyzes craft, coherence, authority, purpose, and voice with genre-calibrated thresholds. Use for refining drafts, diagnosing quality issues, generating quality content, or teaching writing principles.

leegonzales
leegonzales
research
open
academic
14

text-statistics

Analyze text for word count, reading time, complexity metrics, and readability scores. Use when user asks to analyze document length, calculate reading time, or assess text complexity.

leegonzales
leegonzales
research
open
academic
14

annas-archive-ebooks

Use when needing to look up book content, find a book by title/author, download an ebook, or reference material from a published book. Triggers on book lookups, ebook downloads, "find the book", "get the PDF/EPUB of". Downloads produce PDF/EPUB/MOBI files - use ebook-extractor skill to convert to text.

ratacat
ratacat
research
open
scientific-computing
14

hypogenic

Automated hypothesis generation and testing using large language models. Use this skill when generating scientific hypotheses from datasets, combining literature insights with empirical data, testing hypotheses against observational data, or conducting systematic hypothesis exploration for research discovery in domains like deception detection, AI content detection, mental health analysis, or other empirical research tasks.

jackspace
jackspace
research
open
academic
14

brave-search

Use when user asks to search the web, look something up online, find current/recent/latest information, or needs cited answers. Triggers on "search", "look up", "find out about", "what is the current/latest", image searches, news lookups. NOT for searching code/files—only for web/internet searches.

ratacat
ratacat
research
open
academic
14

claimify

Extract and structure claims from discourse into analyzable argument maps with logical relationships and assumptions. Use when analyzing arguments, red-teaming reasoning, synthesizing debates, or transforming conversations into structured claim networks. Triggers include "what are the claims," "analyze this argument," "map the logic," or "find contradictions."

leegonzales
leegonzales
research
open
scientific-computing
14

denario

Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, executing computational experiments, performing literature searches, or generating publication-ready papers in LaTeX format. Supports end-to-end research pipelines with customizable agent orchestration.

jackspace
jackspace
research
open
academic
14

ontology-access-kit

Skills for querying ontologies using the Ontology Access Kit (OAK). This should only be used for complex ontology operations, for basic external ontology searching use the OLS MCP

ai4curation
ai4curation
research
open
astronomy-physics
14

astropy

Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.

jackspace
jackspace
research
open
scientific-computing
14

gtars

High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.

jackspace
jackspace
research
open
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