home/categories/scientific-computing/pharmolix-openbiomed-skills-single-cell-foundation-model-scrna-seq-geneformer-skill-md
scientific-computingresearch
single-cell-foundation-model-geneformer
Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.
maintainer
PharMolix
آخر تحديث 3/16/2026
النجوم
1036
التفرعات
120
quick start
Installation and usage
Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.
التثبيت
$ install --globalskills.sh
الاستخدام
بعد التثبيت، يمكنك استخدام هذه المهارة بتشغيل الأمر التالي في الطرفية:
skills use single-cell-foundation-model-geneformer