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multiqc-qc-reports

Aggregates QC outputs from 150+ bioinformatics tools into a single interactive HTML report. Scans directories for FastQC, samtools, STAR, HISAT2, Trim Galore, featureCounts, Kallisto, Salmon, Picard, and GATK logs; merges statistics across samples with interactive plots. Essential for NGS pipeline QC review. Use FastQC directly instead for single-sample initial assessment; MultiQC is for multi-sample pipeline-wide reporting.

jaechang-hits
maintainer
jaechang-hits
আপডেট হয়েছে 2/18/2026
স্টার
93
ফর্ক
12
quick start

Installation and usage

Aggregates QC outputs from 150+ bioinformatics tools into a single interactive HTML report. Scans directories for FastQC, samtools, STAR, HISAT2, Trim Galore, featureCounts, Kallisto, Salmon, Picard, and GATK logs; merges statistics across samples with interactive plots. Essential for NGS pipeline QC review. Use FastQC directly instead for single-sample initial assessment; MultiQC is for multi-sample pipeline-wide reporting.

ইনস্টলেশন
$ install --globalskills.sh
ব্যবহার

ইনস্টল করার পর, টার্মিনালে নিচের কমান্ড চালিয়ে আপনি এই স্কিল ব্যবহার করতে পারবেন:

skills use multiqc-qc-reports