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pxdesign

De novo protein binder design using PXDesign. Use this skill when designing non-antibody protein binders against a target structure. Covers YAML config creation, CLI invocation, output parsing, and result interpretation. For antibody/nanobody binders, use proteus-ab instead. For structure prediction only, use proteus-fold. For scoring and screening, use proteus-scoring and proteus-screening.

001TMF
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001TMF
Updated 3/23/2026
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quick start

Installation and usage

De novo protein binder design using PXDesign. Use this skill when designing non-antibody protein binders against a target structure. Covers YAML config creation, CLI invocation, output parsing, and result interpretation. For antibody/nanobody binders, use proteus-ab instead. For structure prediction only, use proteus-fold. For scoring and screening, use proteus-scoring and proteus-screening.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use pxdesign