home/categories/scientific-computing/aipoch-medical-research-skills-scientific-skills-data-analysis-pyopenms-skill-skill-md
scientific-computingresearch
pyopenms-skill
Comprehensive tool for computational mass spectrometry using PyOpenMS; use when you need to read/write MS formats (mzML/mzXML/MGF), run signal processing (smoothing/peak picking), detect isotope features, or perform peptide identification in proteomics/metabolomics workflows.
maintainer
aipoch
Updated 3/23/2026
Stars
124
Forks
16
quick start
Installation and usage
Comprehensive tool for computational mass spectrometry using PyOpenMS; use when you need to read/write MS formats (mzML/mzXML/MGF), run signal processing (smoothing/peak picking), detect isotope features, or perform peptide identification in proteomics/metabolomics workflows.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use pyopenms-skill