clif-icu
Analyzes ICU clinical data using the Common Longitudinal ICU data Format (CLIF) and clifpy Python library. Loads and filters CLIF tables (vitals, labs, medications, respiratory support, microbiology) by hospitalization_id and category columns. Computes clinical scores including SOFA, Charlson Comorbidity Index (CCI), and Elixhauser. Creates wide datasets and performs data transformations. Use when working with ICU data, CLIF format, clifpy, clinical scoring, ventilator data, sepsis research, or intensive care analytics.
Installation and usage
Analyzes ICU clinical data using the Common Longitudinal ICU data Format (CLIF) and clifpy Python library. Loads and filters CLIF tables (vitals, labs, medications, respiratory support, microbiology) by hospitalization_id and category columns. Computes clinical scores including SOFA, Charlson Comorbidity Index (CCI), and Elixhauser. Creates wide datasets and performs data transformations. Use when working with ICU data, CLIF format, clifpy, clinical scoring, ventilator data, sepsis research, or intensive care analytics.
Once installed, you can use this skill by running the following command in your terminal:
skills use clif-icu