home/categories/data-analysis/ecnu-icalk-autoskill-skillbank-users-u39-deg-and-marker-gene-heatmap-with-viridis-col-clustering-skill-md
data-analysisdata-ai
deg-and-marker-gene-heatmap-with-viridis-col-clustering
Generates a publication-ready heatmap for differentially expressed genes (DEGs) or marker genes using viridis colormap, column-only hierarchical clustering, and Arial font — applicable to any normalized gene expression matrix with genes as rows and samples/subclusters as columns.
maintainer
ECNU-ICALK
Updated 2/24/2026
Stars
304
Forks
34
quick start
Installation and usage
Generates a publication-ready heatmap for differentially expressed genes (DEGs) or marker genes using viridis colormap, column-only hierarchical clustering, and Arial font — applicable to any normalized gene expression matrix with genes as rows and samples/subclusters as columns.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use deg-and-marker-gene-heatmap-with-viridis-col-clustering