home/categories/bioinformatics/freedomintelligence-openclaw-medical-skills-skills-bio-de-deseq2-basics-skill-md
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bio-de-deseq2-basics
Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold change shrinkage. Use when performing DE analysis with DESeq2.
maintainer
FreedomIntelligence
Updated 3/8/2026
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quick start
Installation and usage
Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold change shrinkage. Use when performing DE analysis with DESeq2.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use bio-de-deseq2-basics