home/categories/scientific-computing/gptomics-bioskills-atac-seq-differential-accessibility-skill-md
scientific-computingresearch

bio-atac-seq-differential-accessibility

Find differentially accessible chromatin regions between conditions using DiffBind or DESeq2. Use when comparing chromatin accessibility between treatment groups, cell types, or developmental stages in ATAC-seq experiments.

GPTomics
maintainer
GPTomics
Updated 2/13/2026
Stars
471
Forks
81
quick start

Installation and usage

Find differentially accessible chromatin regions between conditions using DiffBind or DESeq2. Use when comparing chromatin accessibility between treatment groups, cell types, or developmental stages in ATAC-seq experiments.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use bio-atac-seq-differential-accessibility