scientific-computingresearch
bio-chipseq-peak-calling
ChIP-seq peak calling using MACS3 and HOMER findPeaks. Call narrow peaks for transcription factors or broad peaks for histone modifications. Supports single-caller and multi-caller consensus approaches, input control, fragment size modeling, and various output formats. Use when calling peaks from ChIP-seq alignments.
maintainer
GPTomics
Updated 3/29/2026
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quick start
Installation and usage
ChIP-seq peak calling using MACS3 and HOMER findPeaks. Call narrow peaks for transcription factors or broad peaks for histone modifications. Supports single-caller and multi-caller consensus approaches, input control, fragment size modeling, and various output formats. Use when calling peaks from ChIP-seq alignments.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use bio-chipseq-peak-calling