home/categories/bioinformatics/gptomics-bioskills-genome-annotation-eukaryotic-gene-prediction-skill-md
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bio-genome-annotation-eukaryotic-gene-prediction
Predict protein-coding genes in eukaryotic genomes using BRAKER3 for combined RNA-seq and protein evidence, or GALBA for protein-only evidence. Runs Augustus with trained parameters for accurate gene models. Use when annotating a newly assembled eukaryotic genome or improving existing gene predictions.
maintainer
GPTomics
Updated 2/13/2026
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quick start
Installation and usage
Predict protein-coding genes in eukaryotic genomes using BRAKER3 for combined RNA-seq and protein evidence, or GALBA for protein-only evidence. Runs Augustus with trained parameters for accurate gene models. Use when annotating a newly assembled eukaryotic genome or improving existing gene predictions.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use bio-genome-annotation-eukaryotic-gene-prediction