home/categories/bioinformatics/gptomics-bioskills-single-cell-cell-communication-skill-md
bioinformaticsresearch

bio-single-cell-cell-communication

Infer cell-cell communication networks from scRNA-seq data using CellChat, NicheNet, and LIANA for ligand-receptor interaction analysis. Use when inferring ligand-receptor interactions between cell types.

GPTomics
maintainer
GPTomics
Updated 2/13/2026
Stars
471
Forks
81
quick start

Installation and usage

Infer cell-cell communication networks from scRNA-seq data using CellChat, NicheNet, and LIANA for ligand-receptor interaction analysis. Use when inferring ligand-receptor interactions between cell types.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use bio-single-cell-cell-communication