home/categories/scientific-computing/hxk622-tokendance-backend-app-skills-builtin-scientific-bioinformatics-pydeseq2-skill-md
scientific-computingresearch

pydeseq2

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

hxk622
maintainer
hxk622
Updated 1/19/2026
Stars
1
Forks
0
quick start

Installation and usage

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use pydeseq2