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scientific-computingresearch

arboreto

Gene regulatory network inference with GRNBoost2/GENIE3 algorithms. Infer TF-target relationships from expression data, scalable with Dask, for scRNA-seq and GRN analysis.

View Sourcescientific-computing
lifangda
maintainer
lifangda
Updated 10/29/2025
Stars
32
Forks
9
quick start

Installation and usage

Gene regulatory network inference with GRNBoost2/GENIE3 algorithms. Infer TF-target relationships from expression data, scalable with Dask, for scRNA-seq and GRN analysis.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use arboreto