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tooluniverse-metagenomics-analysis

Analyze microbiome and metagenomics data using MGnify, GTDB, ENA, and literature tools. Search studies by biome/keyword, retrieve taxonomic profiles and functional annotations, classify genomes with GTDB taxonomy, and find related publications. Use for human gut microbiome, soil/ocean metagenomics, and environmental microbiology research.

mims-harvard
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mims-harvard
Updated 3/29/2026
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quick start

Installation and usage

Analyze microbiome and metagenomics data using MGnify, GTDB, ENA, and literature tools. Search studies by biome/keyword, retrieve taxonomic profiles and functional annotations, classify genomes with GTDB taxonomy, and find related publications. Use for human gut microbiome, soil/ocean metagenomics, and environmental microbiology research.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use tooluniverse-metagenomics-analysis