home/categories/scientific-computing/mims-harvard-tooluniverse-skills-tooluniverse-sequence-retrieval-skill-md
scientific-computingresearch

tooluniverse-sequence-retrieval

Retrieves biological sequences (DNA, RNA, protein) from NCBI and ENA with gene disambiguation, accession type handling, and comprehensive sequence profiles. Creates detailed reports with sequence metadata, cross-database references, and download options. Use when users need nucleotide sequences, protein sequences, genome data, or mention GenBank, RefSeq, EMBL accessions.

mims-harvard
maintainer
mims-harvard
Updated 3/29/2026
Stars
1240
Forks
191
quick start

Installation and usage

Retrieves biological sequences (DNA, RNA, protein) from NCBI and ENA with gene disambiguation, accession type handling, and comprehensive sequence profiles. Creates detailed reports with sequence metadata, cross-database references, and download options. Use when users need nucleotide sequences, protein sequences, genome data, or mention GenBank, RefSeq, EMBL accessions.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use tooluniverse-sequence-retrieval