phylogenetic-methods
Comprehensive guide to phylogenetic tree building methods including distance-based (UPGMA, Neighbor-Joining), maximum likelihood (RAxML, IQ-TREE), and Bayesian inference (MrBayes). Covers multiple sequence alignment, distance matrices, bootstrap analysis, consensus methods, tree formats (Newick, Nexus), and tree comparison metrics. Includes implementation patterns for tree visualization and evaluation.
Installation and usage
Comprehensive guide to phylogenetic tree building methods including distance-based (UPGMA, Neighbor-Joining), maximum likelihood (RAxML, IQ-TREE), and Bayesian inference (MrBayes). Covers multiple sequence alignment, distance matrices, bootstrap analysis, consensus methods, tree formats (Newick, Nexus), and tree comparison metrics. Includes implementation patterns for tree visualization and evaluation.
Once installed, you can use this skill by running the following command in your terminal:
skills use phylogenetic-methods