tree-visualization
Comprehensive guide to phylogenetic tree visualization including matplotlib (Python), ggtree (R), and publication-quality figure generation. Covers rectangular, circular, radial layouts, bootstrap annotations, branch coloring, clade highlighting, and interactive visualizations. Based on best practices from Yulab's Tree Data Book.
Installation and usage
Comprehensive guide to phylogenetic tree visualization including matplotlib (Python), ggtree (R), and publication-quality figure generation. Covers rectangular, circular, radial layouts, bootstrap annotations, branch coloring, clade highlighting, and interactive visualizations. Based on best practices from Yulab's Tree Data Book.
Once installed, you can use this skill by running the following command in your terminal:
skills use tree-visualization