data-io-loading

Name: data-io-loading
Author: Starlitnightly

OmicVerse data I/O: use ov.read(), ov.io.read_h5ad, read_10x_h5, read_10x_mtx, read_visium, read_visium_hd, read_nanostring instead of scanpy. Covers h5ad, 10x, spatial, CSV formats.

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maintainer

Starlitnightly

Updated 3/9/2026

Stars

943

Forks

116

quick start

Installation and usage

OmicVerse data I/O: use ov.read(), ov.io.read_h5ad, read_10x_h5, read_10x_mtx, read_visium, read_visium_hd, read_nanostring instead of scanpy. Covers h5ad, 10x, spatial, CSV formats.

Installation

$ install --globalskills.sh

Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use data-io-loading