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Research

Scientific computing and academic tools.

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academic
974

hugging-face-paper-publisher

Publish and manage research papers on Hugging Face Hub. Supports creating paper pages, linking papers to models/datasets, claiming authorship, and generating professional markdown-based research articles.

huggingface
huggingface
research
open
academic
953

strategic-petition-framework

Use when writing persuasive petitions to reverse policy decisions. Based on Li Si's 谏逐客书, combines historical precedent, analogical reasoning (reductio ad absurdum), cost-benefit analysis, and principle appeals.

baojie
baojie
research
open
astronomy-physics
953

calendar-calculation-method

Use when calculating calendars, determining seasonal timing, or establishing the correct 正朔. Covers leap month intercalation using the 19-year Metonic cycle, solstice measurement via shadow length (晷景), and dynastic calendar differences.

baojie
baojie
research
open
computational-chemistry
953

judge-long-distance-military-campaign

Use when evaluating the feasibility of a long-distance surprise military attack. Assesses distance risks, intelligence reliability, supply line vulnerabilities, and contingency planning. Based on Qin's failed attack on Zheng as a cautionary example.

baojie
baojie
research
open
lab-tools
953

yellow-bell-calculation-method

Use when establishing the fundamental pitch standard (黄钟) or deriving all twelve pitch pipes. Calculates the 9-cun base unit from powers of 3 and links musical tuning to weights, measures, and seasonal timing.

baojie
baojie
research
open
academic
950

peer-review

Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating claims/evidence quality use scientific-critical-thinking; for quantitative scoring frameworks use scholar-evaluation.

wu-yc
wu-yc
research
open
academic
950

scholar-evaluation

Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and actionable feedback.

wu-yc
wu-yc
research
open
academic
950

scientific-critical-thinking

Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases and confounders, applying evidence grading frameworks (GRADE, Cochrane Risk of Bias), or teaching critical analysis. Best for understanding evidence quality, identifying flaws. For formal peer review writing use peer-review.

wu-yc
wu-yc
research
open
academic
950

scientific-writing

Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing prose. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting guidelines (CONSORT/STROBE/PRISMA), for research papers and journal submissions.

wu-yc
wu-yc
research
open
academic
950

arxiv-search

Search arXiv physics, math, and computer science preprints using natural language queries. Powered by Valyu semantic search.

wu-yc
wu-yc
research
open
academic
950

biomedical-search

Complete biomedical information search combining PubMed, preprints, clinical trials, and FDA drug labels. Powered by Valyu semantic search.

wu-yc
wu-yc
research
open
academic
950

biorxiv-database

Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.

wu-yc
wu-yc
research
open
academic
950

citation-management

Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.

wu-yc
wu-yc
research
open
academic
950

clinical-trials-search

Search ClinicalTrials.gov with natural language queries. Find clinical trials, enrollment, and outcomes using Valyu semantic search.

wu-yc
wu-yc
research
open
academic
950

literature-review

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).

wu-yc
wu-yc
research
open
academic
950

literature-search

Comprehensive scientific literature search across PubMed, arXiv, bioRxiv, medRxiv. Natural language queries powered by Valyu semantic search.

wu-yc
wu-yc
research
open
academic
950

literature-to-hypothesis

Extracts falsifiable scientific hypotheses (if-then form) from multiple PubMed articles, abstracts, or full texts. Synthesizes supporting evidence, contradictions, and experimental validation suggestions into a structured Markdown report for hypothesis-driven research planning.

wu-yc
wu-yc
research
open
academic
950

medrxiv-search

Search medRxiv medical preprints with natural language queries. Powered by Valyu semantic search.

wu-yc
wu-yc
research
open
academic
950

openalex-database

Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly works. Use for literature searches, research output analysis, citation analysis, and academic database queries.

wu-yc
wu-yc
research
open
academic
950

pubmed-search

Search PubMed biomedical literature with natural language queries powered by Valyu semantic search. Full-text access, integrate into your AI projects.

wu-yc
wu-yc
research
open
academic
950

research-grants

Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader impacts, significance statements, innovation narratives, and compliance with submission requirements.

wu-yc
wu-yc
research
open
academic
950

research-lookup

Look up current research information using Perplexity Sonar Pro Search or Sonar Reasoning Pro models through OpenRouter. Automatically selects the best model based on query complexity. Search academic papers, recent studies, technical documentation, and general research information with citations.

wu-yc
wu-yc
research
open
academic
950

scientific-writing

Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing prose. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting guidelines (CONSORT/STROBE/PRISMA), for research papers and journal submissions.

wu-yc
wu-yc
research
open
academic
950

uspto-database

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

wu-yc
wu-yc
research
open
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