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sragent

Query the Sequence Read Archive (SRA), retrieve scientific publications, and analyze genomics metadata using the SRAgent toolkit. Supports accession conversion (GSE→SRX→SRR), BigQuery metadata queries, manuscript downloads from multiple sources, and scRNA-seq technology identification. Use when working with SRA/GEO datasets, finding publications, or analyzing single-cell sequencing experiments.

ArcInstitute
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ArcInstitute
Actualizado 11/13/2025
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quick start

Installation and usage

Query the Sequence Read Archive (SRA), retrieve scientific publications, and analyze genomics metadata using the SRAgent toolkit. Supports accession conversion (GSE→SRX→SRR), BigQuery metadata queries, manuscript downloads from multiple sources, and scRNA-seq technology identification. Use when working with SRA/GEO datasets, finding publications, or analyzing single-cell sequencing experiments.

Instalación
$ install --globalskills.sh
Uso

Después de instalarlo, puedes usar este skill ejecutando el siguiente comando en tu terminal:

skills use sragent