home/categories/scientific-computing/gptomics-bioskills-differential-expression-deseq2-basics-skill-md
scientific-computingresearch
bio-de-deseq2-basics
Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold change shrinkage. Use when performing DE analysis with DESeq2.
maintainer
GPTomics
Actualizado 4/6/2026
Estrellas
471
Forks
81
quick start
Installation and usage
Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold change shrinkage. Use when performing DE analysis with DESeq2.
Instalación
$ install --globalskills.sh
Uso
Después de instalarlo, puedes usar este skill ejecutando el siguiente comando en tu terminal:
skills use bio-de-deseq2-basics