home/categories/lab-tools/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-population-genetics-epidemiological-genomics-variant-surveillance-skill-md
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bio-epidemiological-genomics-variant-surveillance
Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
maintainer
mdbabumiamssm
Actualizado 2/4/2026
Estrellas
24
Forks
4
quick start
Installation and usage
Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
Instalación
$ install --globalskills.sh
Uso
Después de instalarlo, puedes usar este skill ejecutando el siguiente comando en tu terminal:
skills use bio-epidemiological-genomics-variant-surveillance