home/categories/lab-tools/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-sequence-analysis-alignment-files-duplicate-handling-skill-md
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bio-duplicate-handling
Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.
maintainer
mdbabumiamssm
Actualizado 2/4/2026
Estrellas
24
Forks
4
quick start
Installation and usage
Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.
Instalación
$ install --globalskills.sh
Uso
Después de instalarlo, puedes usar este skill ejecutando el siguiente comando en tu terminal:
skills use bio-duplicate-handling