home/categories/bioinformatics/aipoch-medical-research-skills-scientific-skills-data-analysis-pysam-skill-md
bioinformaticsresearch
pysam
Genomic file toolkit. For reading/writing SAM/BAM/CRAM alignment files, VCF/BCF variant files, FASTA/FASTQ sequences, extracting regions, calculating coverage, suitable for NGS data processing pipelines.
maintainer
aipoch
Mis à jour 3/23/2026
Étoiles
124
Forks
16
quick start
Installation and usage
Genomic file toolkit. For reading/writing SAM/BAM/CRAM alignment files, VCF/BCF variant files, FASTA/FASTQ sequences, extracting regions, calculating coverage, suitable for NGS data processing pipelines.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use pysam