home/categories/scientific-computing/davila7-claude-code-templates-cli-tool-components-skills-scientific-pysam-skill-md
scientific-computingresearch
pysam
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
maintainer
davila7
Mis à jour 1/20/2026
Étoiles
17577
Forks
1576
quick start
Installation and usage
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use pysam