home/categories/scientific-computing/davila7-claude-code-templates-cli-tool-components-skills-scientific-scanpy-skill-md
scientific-computingresearch
scanpy
Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis.
maintainer
davila7
Mis à jour 1/20/2026
Étoiles
17577
Forks
1576
quick start
Installation and usage
Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use scanpy