home/categories/scientific-computing/gptomics-bioskills-copy-number-cnvkit-analysis-skill-md
scientific-computingresearch

bio-copy-number-cnvkit-analysis

Detect copy number variants from targeted/exome sequencing using CNVkit. Supports tumor-normal pairs, tumor-only, and germline CNV calling. Use when detecting CNVs from WES or targeted panel sequencing data.

GPTomics
maintainer
GPTomics
Mis à jour 4/6/2026
Étoiles
471
Forks
81
quick start

Installation and usage

Detect copy number variants from targeted/exome sequencing using CNVkit. Supports tumor-normal pairs, tumor-only, and germline CNV calling. Use when detecting CNVs from WES or targeted panel sequencing data.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use bio-copy-number-cnvkit-analysis