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scientific-computingresearch

bio-pathway-wikipathways

WikiPathways enrichment using clusterProfiler and rWikiPathways. Use when analyzing gene lists against community-curated open-source pathways. Performs over-representation analysis and GSEA for 30+ species.

Voir le code sourcescientific-computing
GPTomics
maintainer
GPTomics
Mis à jour 4/6/2026
Étoiles
471
Forks
81
quick start

Installation and usage

WikiPathways enrichment using clusterProfiler and rWikiPathways. Use when analyzing gene lists against community-curated open-source pathways. Performs over-representation analysis and GSEA for 30+ species.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use bio-pathway-wikipathways