home/categories/computational-chemistry/gptomics-bioskills-rna-structure-secondary-structure-prediction-skill-md
computational-chemistryresearch

bio-rna-structure-secondary-structure-prediction

Predicts RNA secondary structures using minimum free energy folding and partition function analysis with ViennaRNA (RNAfold, RNAalifold, RNAcofold). Computes base-pair probabilities, centroid structures, and consensus structures from alignments. Use when predicting RNA folding, evaluating structural stability, or comparing structures across homologs.

GPTomics
maintainer
GPTomics
Mis à jour 2/13/2026
Étoiles
471
Forks
81
quick start

Installation and usage

Predicts RNA secondary structures using minimum free energy folding and partition function analysis with ViennaRNA (RNAfold, RNAalifold, RNAcofold). Computes base-pair probabilities, centroid structures, and consensus structures from alignments. Use when predicting RNA folding, evaluating structural stability, or comparing structures across homologs.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use bio-rna-structure-secondary-structure-prediction