home/categories/bioinformatics/gptomics-bioskills-spatial-transcriptomics-spatial-visualization-skill-md
bioinformaticsresearch
bio-spatial-transcriptomics-spatial-visualization
Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images. Use when visualizing spatial expression patterns.
maintainer
GPTomics
Mis à jour 2/13/2026
Étoiles
471
Forks
81
quick start
Installation and usage
Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images. Use when visualizing spatial expression patterns.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use bio-spatial-transcriptomics-spatial-visualization