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bio-workflows-metabolomics-pipeline

End-to-end metabolomics workflow from raw MS data to pathway analysis. Orchestrates XCMS preprocessing, annotation, normalization, statistical analysis, and pathway mapping. Use when processing LC-MS metabolomics data.

Voir le code sourcebioinformatics
GPTomics
maintainer
GPTomics
Mis à jour 3/28/2026
Étoiles
471
Forks
81
quick start

Installation and usage

End-to-end metabolomics workflow from raw MS data to pathway analysis. Orchestrates XCMS preprocessing, annotation, normalization, statistical analysis, and pathway mapping. Use when processing LC-MS metabolomics data.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use bio-workflows-metabolomics-pipeline