multiqc-qc-reports
Aggregates QC outputs from 150+ bioinformatics tools into a single interactive HTML report. Scans directories for FastQC, samtools, STAR, HISAT2, Trim Galore, featureCounts, Kallisto, Salmon, Picard, and GATK logs; merges statistics across samples with interactive plots. Essential for NGS pipeline QC review. Use FastQC directly instead for single-sample initial assessment; MultiQC is for multi-sample pipeline-wide reporting.
Installation and usage
Aggregates QC outputs from 150+ bioinformatics tools into a single interactive HTML report. Scans directories for FastQC, samtools, STAR, HISAT2, Trim Galore, featureCounts, Kallisto, Salmon, Picard, and GATK logs; merges statistics across samples with interactive plots. Essential for NGS pipeline QC review. Use FastQC directly instead for single-sample initial assessment; MultiQC is for multi-sample pipeline-wide reporting.
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use multiqc-qc-reports