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tooluniverse-proteomics-data-retrieval

Find and retrieve proteomics datasets from public repositories including MassIVE and ProteomeXchange (which aggregates PRIDE, PeptideAtlas, jPOST, and iProX). Search by species, keyword, or accession. Get detailed dataset metadata including instruments, publications, species, modifications, and file counts. Use when asked to find proteomics datasets, search for mass spectrometry data, look up ProteomeXchange or MassIVE accessions, or discover publicly available proteomics experiments for a given organism or topic.

mims-harvard
maintainer
mims-harvard
Mis à jour 3/29/2026
Étoiles
1240
Forks
191
quick start

Installation and usage

Find and retrieve proteomics datasets from public repositories including MassIVE and ProteomeXchange (which aggregates PRIDE, PeptideAtlas, jPOST, and iProX). Search by species, keyword, or accession. Get detailed dataset metadata including instruments, publications, species, modifications, and file counts. Use when asked to find proteomics datasets, search for mass spectrometry data, look up ProteomeXchange or MassIVE accessions, or discover publicly available proteomics experiments for a given organism or topic.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use tooluniverse-proteomics-data-retrieval