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cellxgene-census-query

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, and integrate with scanpy/PyTorch for population-scale single-cell analysis. Use this skill when: (1) Querying single-cell expression data by cell type, tissue, or disease, (2) Exploring available single-cell datasets and metadata, (3) Training machine learning models on single-cell data, (4) Performing large-scale cross-dataset analyses.

PharMolix
maintainer
PharMolix
Mis à jour 3/16/2026
Étoiles
1036
Forks
120
quick start

Installation and usage

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, and integrate with scanpy/PyTorch for population-scale single-cell analysis. Use this skill when: (1) Querying single-cell expression data by cell type, tissue, or disease, (2) Exploring available single-cell datasets and metadata, (3) Training machine learning models on single-cell data, (4) Performing large-scale cross-dataset analyses.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use cellxgene-census-query