single-cell-foundation-model-scgpt
Use this skill when a task involves the local scGPT project in /DATA/disk0/zhaosy/home/scGPT, especially scGPT preprocessing and binning, checkpoint vocabulary matching, cell embedding extraction, reference mapping, fine-tuning scGPT for integration or annotation, or using scGPT tutorials for GRN, perturbation, multiomics, and reference mapping workflows.
Installation and usage
Use this skill when a task involves the local scGPT project in /DATA/disk0/zhaosy/home/scGPT, especially scGPT preprocessing and binning, checkpoint vocabulary matching, cell embedding extraction, reference mapping, fine-tuning scGPT for integration or annotation, or using scGPT tutorials for GRN, perturbation, multiomics, and reference mapping workflows.
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use single-cell-foundation-model-scgpt