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phylogenetic-methods

Comprehensive guide to phylogenetic tree building methods including distance-based (UPGMA, Neighbor-Joining), maximum likelihood (RAxML, IQ-TREE), and Bayesian inference (MrBayes). Covers multiple sequence alignment, distance matrices, bootstrap analysis, consensus methods, tree formats (Newick, Nexus), and tree comparison metrics. Includes implementation patterns for tree visualization and evaluation.

roeimed0
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roeimed0
Mis à jour 12/25/2025
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quick start

Installation and usage

Comprehensive guide to phylogenetic tree building methods including distance-based (UPGMA, Neighbor-Joining), maximum likelihood (RAxML, IQ-TREE), and Bayesian inference (MrBayes). Covers multiple sequence alignment, distance matrices, bootstrap analysis, consensus methods, tree formats (Newick, Nexus), and tree comparison metrics. Includes implementation patterns for tree visualization and evaluation.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use phylogenetic-methods