home/categories/data-analysis/tiangzlab-omicsclaw-skills-genomics-genomics-alignment-skill-md
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genomics-alignment

Alignment statistics from SAM/BAM files: mapping rate, MAPQ distribution, insert size, duplicate rate, proper pair rate. Mirrors samtools-flagstat.

TianGzlab
maintainer
TianGzlab
Mis à jour 3/27/2026
Étoiles
115
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23
quick start

Installation and usage

Alignment statistics from SAM/BAM files: mapping rate, MAPQ distribution, insert size, duplicate rate, proper pair rate. Mirrors samtools-flagstat.

Installation
$ install --globalskills.sh
Utilisation

Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :

skills use genomics-alignment