scientific-computingresearch
sc-filter
Filter cells and genes from single-cell RNA-seq AnnData objects using QC-derived thresholds or tissue presets. This wrapper removes low-quality cells/genes but does not normalize, cluster, or annotate the dataset.
maintainer
TianGzlab
Mis à jour 4/4/2026
Étoiles
115
Forks
23
quick start
Installation and usage
Filter cells and genes from single-cell RNA-seq AnnData objects using QC-derived thresholds or tissue presets. This wrapper removes low-quality cells/genes but does not normalize, cluster, or annotate the dataset.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use sc-filter