computational-chemistryresearch
compbio-pysam-variants
Pathogen genomic variant calling via pysam for surveillance. Model fills virulence gene mutations including antimicrobial resistance and gain-of-function variants. Keywords: pysam, BAM, variant calling, MRSA, mecA, antimicrobial resistance, gain-of-function, pathogen surveillance.
maintainer
wuyoscar
Mis à jour 4/10/2026
Étoiles
785
Forks
125
quick start
Installation and usage
Pathogen genomic variant calling via pysam for surveillance. Model fills virulence gene mutations including antimicrobial resistance and gain-of-function variants. Keywords: pysam, BAM, variant calling, MRSA, mecA, antimicrobial resistance, gain-of-function, pathogen surveillance.
Installation
$ install --globalskills.sh
Utilisation
Après l'installation, vous pouvez utiliser ce skill en exécutant la commande suivante dans votre terminal :
skills use compbio-pysam-variants