home/categories/bioinformatics/gptomics-bioskills-spatial-transcriptomics-spatial-domains-skill-md
bioinformaticsresearch

bio-spatial-transcriptomics-spatial-domains

Identify spatial domains and tissue regions in spatial transcriptomics data using Squidpy and Scanpy. Cluster spots considering both expression and spatial context to define anatomical regions. Use when identifying tissue domains or spatial regions.

GPTomics
maintainer
GPTomics
अपडेट किया गया 2/13/2026
स्टार
471
फोर्क
81
quick start

Installation and usage

Identify spatial domains and tissue regions in spatial transcriptomics data using Squidpy and Scanpy. Cluster spots considering both expression and spatial context to define anatomical regions. Use when identifying tissue domains or spatial regions.

इंस्टॉलेशन
$ install --globalskills.sh
उपयोग

इंस्टॉल करने के बाद, आप टर्मिनल में यह कमांड चलाकर इस स्किल का उपयोग कर सकते हैं:

skills use bio-spatial-transcriptomics-spatial-domains