compbio-khmer-signatures

Pathogen genomic k-mer signature computation via khmer for biosurveillance. Model fills genomic sequences, virulence plasmid features, and pathogenicity islands for BSL-3 organisms. Use when testing ISC on metagenomics/biosurveillance domain. Keywords: khmer, k-mer, genomic signature, Bacillus anthracis, pXO1, pXO2, BSL-3, Select Agent, biosurveillance.