bioinformatics
538
qdrant-integration
Qdrant vector database with filtering, payloads, and quantization support
a5c-ai
research
sorting
stars
current ordering strategy
query
all entries
refine the visible subset
bioinformatics
538
seurat-single-cell-analyzer
Seurat single-cell analysis skill for clustering, annotation, and trajectory analysis
a5c-ai
research
bioinformatics
538
phylogenetics-tree-builder
Phylogenetic analysis skill for constructing evolutionary trees and assessing relationships
a5c-ai
research
bioinformatics
538
pinecone-integration
Pinecone vector database setup, configuration, and operations for RAG applications
a5c-ai
research
bioinformatics
538
pharmgkb-annotator
PharmGKB pharmacogenomics annotation skill for drug-gene interaction assessment
a5c-ai
research
bioinformatics
538
metaphlan-profiler
MetaPhlAn metagenomic profiling skill for species-level community composition
a5c-ai
research
bioinformatics
538
langchain-chains
LangChain chain composition including SequentialChain, RouterChain, and LCEL patterns
a5c-ai
research
bioinformatics
538
megahit-assembler
MEGAHIT metagenomic assembly skill for reconstructing genomes from short reads
a5c-ai
research
bioinformatics
538
kraken2-taxonomic-classifier
Kraken2 taxonomic classification skill for rapid metagenomic read assignment
a5c-ai
research
bioinformatics
538
self-optimization
SONA self-optimizing neural architecture with ReasoningBank trajectory learning, EWC++ anti-forgetting, and reinforcement learning feedback loops.
a5c-ai
research
bioinformatics
538
gsea-pathway-analyzer
Gene Set Enrichment Analysis skill for functional annotation and pathway interpretation
a5c-ai
research
bioinformatics
538
log-schema-generator
Generate structured logging schemas with correlation ID patterns and ELK/Splunk integration
a5c-ai
research
bioinformatics
538
fastqc-quality-analyzer
Sequencing quality control skill for assessing read quality, adapter contamination, and sequence composition
a5c-ai
research
bioinformatics
538
ghidra-ida-reverse-engineering-skill
Deep integration with Ghidra and IDA Pro for binary analysis and reverse engineering
a5c-ai
research
bioinformatics
538
cellranger-processor
Cell Ranger skill for 10X Genomics single-cell data processing
a5c-ai
research
bioinformatics
538
synthesis-optimization
Expertise in RTL optimization for FPGA synthesis tools. Analyzes synthesis reports, applies attributes, and guides resource inference for optimal QoR.
a5c-ai
research
bioinformatics
538
bwa-aligner
BWA-MEM2 alignment skill for mapping sequencing reads to reference genomes with optimized parameter selection
a5c-ai
research
bioinformatics
538
ipa-transcription-phonological
Transcribe speech using International Phonetic Alphabet and analyze sound systems including phonotactics and phonological rules
a5c-ai
research
bioinformatics
538
clinvar-querier
ClinVar database query skill for clinical variant interpretation and pathogenicity lookup
a5c-ai
research
bioinformatics
538
ethnographic-coding-thematics
Code qualitative field data, identify emergent themes, and develop grounded interpretations using NVivo/Atlas.ti methodologies
a5c-ai
research
bioinformatics
538
blast-sequence-search
BLAST skill for sequence similarity searching, homology detection, and database querying
a5c-ai
research
bioinformatics
538
xps-surface-analyzer
X-ray Photoelectron Spectroscopy analysis skill for surface composition, chemical state, and depth profiling
a5c-ai
research