home/categories/scripting/gptomics-bioskills-workflow-management-snakemake-workflows-skill-md
scriptingdevelopment

bio-workflow-management-snakemake-workflows

Build reproducible bioinformatics pipelines with Snakemake using rules, wildcards, and automatic dependency resolution. Use when creating Python-based workflows, automating multi-step analyses with make-like dependency tracking, or running pipelines on HPC clusters with SLURM.

GPTomics
maintainer
GPTomics
更新日 2/13/2026
スター
471
フォーク
81
quick start

Installation and usage

Build reproducible bioinformatics pipelines with Snakemake using rules, wildcards, and automatic dependency resolution. Use when creating Python-based workflows, automating multi-step analyses with make-like dependency tracking, or running pipelines on HPC clusters with SLURM.

インストール
$ install --globalskills.sh
使い方

インストール後、ターミナルで以下のコマンドを実行してこのスキルを使用できます:

skills use bio-workflow-management-snakemake-workflows