home/categories/astronomy-physics/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-genomics-spatial-transcriptomics-bioskills-spatial-visualization-skill-md
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bio-spatial-transcriptomics-spatial-visualization

Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images. Use when visualizing spatial expression patterns.

mdbabumiamssm
maintainer
mdbabumiamssm
更新日 2/4/2026
スター
24
フォーク
4
quick start

Installation and usage

Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images. Use when visualizing spatial expression patterns.

インストール
$ install --globalskills.sh
使い方

インストール後、ターミナルで以下のコマンドを実行してこのスキルを使用できます:

skills use bio-spatial-transcriptomics-spatial-visualization